279 datasets found

Data described here is associated with the Yang et al., 2017, PLOS Genetics. The data types in this directory tree are: GERP annotation data, bam and SNP data, and ReadMe text...

We report here the genome sequence and morphological characterization of phages p000v and p000y that infect the bacterial pathogen Shigatoxigenic Escherichia coli O157:H7 and...

We are uploadind the mapped read (*.bam) and genotypic files (vcf) used in the publication: Leveraging mutational burden for complex trait prediction in sorghum (Valluru et al....

These data files are associated with The Plant Genome article: Gault CM, Kremling KA, Buckler ES. Tripsacum de novo transcriptome assemblies reveal parallel gene evolution with...

This data set consists of 3-D volumes that represent Zea mays root crowns, of the Illinois Protein Strain Recombinant Inbred (IPSRI) population. This data set can be used to...

This data set consists of photographs (2-D images) of root crowns of Zea mays, of the Illinois Protein Strain Recombinant Inbred (IPSRI) population. This data set can be used to...

Supporting data for analyses of hybrid panels in “The relevance of dominance and functional annotations to predict agronomic traits in hybrid maize” (bioRxiv:...

This dataset includes 17.8 million SNP in a single teosinte population covering 4455 progeny and 18.9 million SNP in a single maize landrace population covering 4398 progeny,...

Contains images and corresponding phenotypic data for >6,000 individual maize tassels from two populations: WiDiv, a diversity panel; and PHW65 NAM, a nested association mapping...

Background. The phyllosphere hosts a variety of microorganisms, including bacteria, that can play a positive or negative role in the success of the host plant. Bacterial...

The dataset is utilized for the application of methods detailed in the paper titled "Segmenting Tubular Structures in Biological Images via Geometry-Aware Stretching Active...

This dataset contains river fragmentation and regulation time series in the the contiguous United States. The database includes processed and analyzed river fragments from the...

The dataset contains two folders: 1) A folder with images of procedural soghum plants and 2) a folder with segmentation masks corresponding to the procedural sorghum plants

This dataset is used for reproducing results from a novel method called scAGN for cell-type identification from an unlabeled transcriptomics dataset given a reference dataset...

ParFlow-CLM Model of the San Joaquin River Basin. This iteration of the model includes groundwater pumping and irrigation inputs. All datasets (except NLDAS forcing data) are...

The folder contains images and data sets of pot and field experiments. For DIRT_Cassava_pot.csv and Cassava_pot_Images file: The pot experiment was conducted at Mahidol...

Used in conjunction with corresponding MinION nanopore fast5 sequence datasets, the logfiles in this repository provide information on how individual reads were handled by the...

This hand-labeled globally sampled urban flood observation dataset generated by Social[Pixel] lab is a high-resolution dataset labeled based on 3m PlanetScope data. It contains...

This hand-labeled global surface water validation dataset generated by Social[Pixel] lab is a high-resolution dataset labeled based on 3m PlanetScope data. It contains manual...

This directory contains raw, pre-processed, and normalized LCMS metabolomic data from 602 inbred maize lines. LCMS data were generated by a Waters ACQUITY TQD Tandem Quadrupole...