RUBRIC Oxford MinION nanopore selective sequencing logfiles

Used in conjunction with corresponding MinION nanopore fast5 sequence datasets, the logfiles in this repository provide information on how individual reads were handled by the RUBRIC (Read Until with Basecall and Reference Informed Criteria) selective sequencing software, i.e., whether individual reads were admitted to the selection process and whether they then received "skip" or "sequence" decisions. Details of the corresponding experiments and analysis of selective sequencing results for these datasets are provided at https://doi.org/10.1101/460014 .

Data and Resources

Additional Info

Field Value
Author Michael Bartsch
Version 1.0
Last Updated September 10, 2026, 18:02 (UTC)
Published April 8, 2026, 06:57 (UTC)
Citation Michael Bartsch 2019. RUBRIC Oxford MinION nanopore selective sequencing logfiles. CyVerse Data Commons. DOI 10.25739/71ne-xy91
contributor Harrison Edwards, Raga Krishnakumar
de_created_date 2019-01-31T22:36:13Z
de_modified_date 2020-02-20T22:05:33Z
fundingReference US Department of Energy
identifierType DOI
publisher CyVerse Data Commons
relatedIdentifier https://www.ncbi.nlm.nih.gov/bioproject/PRJNA491460, doi: https://doi.org/10.1101/460014
resourceType Selective sequencing logfiles