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Valluru 2019 Genetics
We are uploadind the mapped read (*.bam) and genotypic files (vcf) used in the publication: Leveraging mutational burden for complex trait prediction in sorghum (Valluru et al.... -
Tripsacum Transcriptomes
These data files are associated with The Plant Genome article: Gault CM, Kremling KA, Buckler ES. Tripsacum de novo transcriptome assemblies reveal parallel gene evolution with... -
Topp Zea mays gels 3d volumes 2016
This data set consists of 3-D volumes that represent Zea mays root crowns, of the Illinois Protein Strain Recombinant Inbred (IPSRI) population. This data set can be used to... -
Topp Zea mays 2d DIRT images 2016
This data set consists of photographs (2-D images) of root crowns of Zea mays, of the Illinois Protein Strain Recombinant Inbred (IPSRI) population. This data set can be used to... -
The genetic architecture of the maize progenitor, teosinte, and how it was...
This dataset includes 17.8 million SNP in a single teosinte population covering 4455 progeny and 18.9 million SNP in a single maize landrace population covering 4398 progeny,... -
tassel_selection
Contains images and corresponding phenotypic data for >6,000 individual maize tassels from two populations: WiDiv, a diversity panel; and PHW65 NAM, a nested association mapping... -
Stomatal Microtubule Detection Dataset
The dataset is utilized for the application of methods detailed in the paper titled "Segmenting Tubular Structures in Biological Images via Geometry-Aware Stretching Active... -
scAGN dataset
This dataset is used for reproducing results from a novel method called scAGN for cell-type identification from an unlabeled transcriptomics dataset given a reference dataset... -
San Joaquin Basin Model - Grace Match
ParFlow-CLM Model of the San Joaquin River Basin. This iteration of the model includes groundwater pumping and irrigation inputs. All datasets (except NLDAS forcing data) are... -
Saengwilai_Cassava_2019
The folder contains images and data sets of pot and field experiments. For DIRT_Cassava_pot.csv and Cassava_pot_Images file: The pot experiment was conducted at Mahidol... -
RUBRIC Oxford MinION nanopore selective sequencing logfiles
Used in conjunction with corresponding MinION nanopore fast5 sequence datasets, the logfiles in this repository provide information on how individual reads were handled by the... -
Rohit_UrbanFloodObservation_2024
This hand-labeled globally sampled urban flood observation dataset generated by Social[Pixel] lab is a high-resolution dataset labeled based on 3m PlanetScope data. It contains... -
Rohit_GlobalSurfaceWaterDataset_2024
This hand-labeled global surface water validation dataset generated by Social[Pixel] lab is a high-resolution dataset labeled based on 3m PlanetScope data. It contains manual... -
Rodriguez_MaizePhenolics_2022
This directory contains raw, pre-processed, and normalized LCMS metabolomic data from 602 inbred maize lines. LCMS data were generated by a Waters ACQUITY TQD Tandem Quadrupole... -
Reicher_PooledProteinTagging_2020
In our manuscript "Pooled protein tagging, cellular imaging and in situ sequencing for monitoring drug action in real time" we describe a scalable method to characterize effects... -
Public Data Release of the Event Horizon Telescope 2021 Observations
This data delivery contains what is defined by the Event Horizon Telescope Collaboration (EHTC) as L1 data for the Very Long Baseline Interferometry (VLBI) 1-mm 2021 observing... -
Public Data Release of the Event Horizon Telescope 2018 Observations
The Event Horizon Telescope Collaboration (EHTC) and Joint ALMA Observatory (JAO) announce the public data release of the Very Long Baseline Interferometry (VLBI) 1-mm 2018... -
Public Data Release of the Event Horizon Telescope 2017 Observations
The Event Horizon Telescope Collaboration (EHTC) and Joint ALMA Observatory (JAO) announce the public data release of the Very Long Baseline Interferometry (VLBI) 1-mm 2017... -
Protein stability profiles reflect plant species' evolutionary history
Protein thermostability predictions for Arabidopsis, maize, and poplar created using prokaryote protein optimal temperatures to estimate site-specific temperature sensitivity.... -
Predicting protein temperature sensitivity across the prokaryote-eukaryote divide
Protein thermostability is important for fitness, but it is difficult to measure stability for every protein in the proteome. Fortunately, protein thermostability is correlated...