Intelligent Metadata Compilation to Enhance Synthesis of Mass Spectrometry-Based Proteomics
Data and Resources
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Data-CatalogDirectory
Folder — browse its contents on the CyVerse Data Store
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origFinal_annotationsDirectory
Folder — browse its contents on the CyVerse Data Store
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UserDataDirectory
Folder — browse its contents on the CyVerse Data Store
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dataDirectory
Folder — browse its contents on the CyVerse Data Store
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outputsDirectory
Folder — browse its contents on the CyVerse Data Store
Additional Info
| Field | Value |
|---|---|
| Author | Wout Bittremieux |
| Last Updated | September 10, 2026, 18:10 (UTC) |
| Published | August 5, 2026, 18:10 (UTC) |
| Citation | Wout Bittremieux 2025. Intelligent Metadata Compilation to Enhance Synthesis of Mass Spectrometry-Based Proteomics. CyVerse Data Commons. |
| Description | Develops automated workflows extracting and standardizing proteomics metadata using bioinformatics and natural language processing. Enhances PRIDE repository accessibility for large-scale data integration and machine-learning driven discovery. |
| PublicationYear | 2025 |
| Publisher | CyVerse Data Commons |
| Rights | This material is based upon work supported by the U.S. National Science Foundation under Award No. #2335029. Any opinions, findings and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the U.S. National Science Foundation. |
| Subject | mass spectrometry, metadata standardization, proteomics databases, data reusability, natural language processing, bioinformatics |
| de_created_date | 2026-03-04T17:20:22Z |
| de_modified_date | 2026-07-28T22:07:47Z |