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Mo17 Whole Genome Bisulfate Sequencing (WGBS)
Original sequencing reads as well as aligned, processed files are included for maize Mo17 genotype. -
CML322 Whole Genome Bisulfate Sequencing (WGBS)
Original sequencing reads as well as aligned, processed files are included for maize CML322 genotype. -
B73 Whole Genome Bisulfate Sequencing (WGBS)
Original sequencing reads as well as aligned, processed files are included for maize B73 genotype. -
Oryza officinalis complex gene and repeat annotations
Gene and repeat annotations for Oryza officinalis, Oryza eichingeri and Oryza rhizomatis -
RUBRIC Oxford MinION nanopore selective sequencing logfiles
Used in conjunction with corresponding MinION nanopore fast5 sequence datasets, the logfiles in this repository provide information on how individual reads were handled by the... -
Saengwilai_Cassava_2019
The folder contains images and data sets of pot and field experiments. For DIRT_Cassava_pot.csv and Cassava_pot_Images file: The pot experiment was conducted at Mahidol... -
Rohit_UrbanFloodObservation_2024
This hand-labeled globally sampled urban flood observation dataset generated by Social[Pixel] lab is a high-resolution dataset labeled based on 3m PlanetScope data. It contains... -
Rohit_GlobalSurfaceWaterDataset_2024
This hand-labeled global surface water validation dataset generated by Social[Pixel] lab is a high-resolution dataset labeled based on 3m PlanetScope data. It contains manual... -
Rodriguez_MaizePhenolics_2022
This directory contains raw, pre-processed, and normalized LCMS metabolomic data from 602 inbred maize lines. LCMS data were generated by a Waters ACQUITY TQD Tandem Quadrupole... -
Reicher_PooledProteinTagging_2020
In our manuscript "Pooled protein tagging, cellular imaging and in situ sequencing for monitoring drug action in real time" we describe a scalable method to characterize effects... -
scAGN dataset
This dataset is used for reproducing results from a novel method called scAGN for cell-type identification from an unlabeled transcriptomics dataset given a reference dataset... -
The genetic architecture of the maize progenitor, teosinte, and how it was...
This dataset includes 17.8 million SNP in a single teosinte population covering 4455 progeny and 18.9 million SNP in a single maize landrace population covering 4398 progeny,... -
Construction of the third-generation Zea mays haplotype map
An international consortium of maize research groups combined resources to develop the maize haplotype version 3 (HapMap 3), built from whole-genome sequencing data from 1218... -
Impact of Green Infrastructure on Canopy Height
This folder contains models created from lidar to investigate the impact of Green Infrastructure on vegetation growth. The lidar data used is stored within this folder as well... -
Data packages for One Thousand Plant transcriptomes and phylogenomics of green plants
Transcript assemblies, multiple sequence alignments, gene tree and species trees included in analyses described in One Thousand Plant Transcriptomes Initiative publication. Data... -
Brassicaceae_lincRNAs
Files of use for examining lincRNAs in Brassicaceae -
CS18_G2F
RGB and multi-spectral images with generated orthomosaics taken over the Genomes 2 Fields (G2F; https://www.genomes2fields.org/) project in College Station, TX, 2018 season. (CS18) -
High Throughput Sorghum Phenotyping Data
High Throughput Sorghum Phenotyping Data -
Fluctuations of the transcription factor ATML1 generate the pattern of giant...
These files are the primary time lapse imaging data for the paper: Heather M. Meyer, Jose Teles, Pau Formosa-Jordan, Yassin Refahi, Rita San-Bento, Gwyneth Ingram, Henrik... -
McConnell_Coverage_2022
In our manuscript "Immune gene variation associated with chromosome-scale differences among individual zebrafish genomes" we describe immune gene variation among individual...